D5S2800

Other Autosomal STRs

D5S2800 is a tetranucleotide short tandem repeat (STR) locus on chromosome 5 (5q11.2), an autosomal STR outside the CODIS core set.

Basic Information

Chromosome

Cytogenetic Location

5q11.2

STRNaming template (FSSG)

AGGT[n]AGAC[n]AGAT[n]

Type

Tetranucleotide

Reference Allele

Explore internal sequence structure

See how the STRNaming name of the reference allele maps onto its sequence: repeat blocks, flanking regions and flanking variants.

Genomic Coordinates

Repeat region

chr5:59,403,132-59,403,199 (68 bp)

Motif and sequences are shown on the forward (+) strand of GRCh38.

Sequence structure (FSSG)

ISFG minimum range, bracketing and kit coverage from the Forensic Sequence Structure Guide, FSSG v6.1 (STRidER; distributed as FSSG_v6-1_beta.xlsx).

STRNaming Formatted ISFG Minimum Range for Common Alleles (FSSG)

AGGT[n]AGAC[n]AGAT[n]

Reference allele (GRCh38) named with STRNaming 1.2.1

CE17_AGGT[3]AGAC[8]AGAT[4]

Historical bracketing (2016-2023)

[GGTA]3 [GACA]8 [GATA]3 [GATT]3

ISFG minimum range (GRCh38)

chr5:59,403,126-59,403,203 (78 bp)

MPS kits covering this locus

Related markers

Other STR markers on chromosome 5

Other autosomal STRs